关闭
 
读者在线:用户名 密码
首页 期刊简介 投稿须知 期刊目录 专家风采 编委会 特邀顾问 联系我们 移动出版
  1. 1
  2. 2
  3. 3
  4. 4
  5. 5



刊物信息

期刊名称:药物分析杂志
主管单位:中国科学技术协会
主办单位:中国药学会
承办:中国食品药品检定研究院
主编:金少鸿
地址:北京天坛西里2号
邮政编码:100050
电话:010-67012819,67058427
电子邮箱:ywfx@nifdc.org.cn
国际标准刊号:ISSN 0254-1793
国内统一刊号:CN 11-2224/R
邮发代号:2-237
 

访问统计
您是第  1 0 5 3 0 2 8 8 位浏览者
您当前的位置:首页 >> 正文

基于高通量测序揭示重楼根际土及不同部位真菌群落差异

High-throughput sequencing-based fungal communities of rhizosphere soil and different parts of Paris plant

分类号:R917
出版年·卷·期(页码):2020,40 (3):455-461
DOI: 10.16155/j.0254-1793.2017.01.01
-----摘要:-------------------------------------------------------------------------------------------

目的:分析长药隔重楼内生菌门类及不同部位真菌群落差异,为寻找促进有效组分合成的功能菌群的研究奠定基础。方法:利用高通量测序技术对陕产长药隔重楼植物内生真菌及根际土菌群基因组遂行扩增子序列测定,并对菌群多样性及不同部位内生真菌群落差异分析。结果:长药隔重楼内生真菌群落多样性Chao1指数、ACE指数、Shannon指数及Simpson指数均表现为根 > 叶 > 根茎。根际土壤优势真菌为担子菌门,根部优势门为球囊菌门真菌,根茎及叶的优势菌群为子囊菌门。结论:长药隔重楼根际土壤与根、根茎及叶部优势菌群多样性及群落均表现出显著性差异,该实验为挖掘重楼属内生菌对重楼代谢产物的合成调控产生影响及影响机制提供研究基础。

-----英文摘要:---------------------------------------------------------------------------------------

Objective: To analyze the differences of endophytic fungi and fungal communities in different parts of Paris polyphylla Sm. var. thibetica(Franch.)Hara and lay a foundation for finding functional bacteria that can promote the synthesis of effective components. Methods: The genomes of endophytic fungi and rhizosphere microorganisms were sequenced by high-throughput sequencing technology to Paris polyphylla Sm. var. thibetica(Franch.)Hara from Shaanxi Province,and the diversity of bacteria and the difference of endophytic fungi communities in different parts were analyzed. Results: The results showed that Chao1 index,ACE index、Shannon index and Simpson index of endophytic fungi community diversity in different parts of Paris polyphylla Sm. var. thibetica(Franch.)Hara was in the order of root > leaf > rhizome. In addition,the results showed that there were significant differences in microbial communities between rhizosphere soil and different parts of plants. The dominant fungi in rhizosphere soil were Basidiomycota. The dominant phylum in rhizome of Paris polyphylla Sm. var. thibetica(Franch.)Hara was Glomeromycota;the dominant phylum of rhizome and leaf was Ascomycota. Conclusion: There are significant differences in diversity of dominant flora and community between rhizosphere soil and root,rhizome and leaf. This experiment provides a basis for further understanding the effect and mechanism of endophytic microorganism on the synthesis and regulation of metabolites in Paris L.

-----参考文献:---------------------------------------------------------------------------------------
[1] 中国科学院中国植物志编辑委员会.中国植物志.第十五卷[M].北京:科学出版社,1978:88 Chinese Flora Editorial Committee.Chinese Academy of Sciences.Chinese Flora.Vol15[M].Beijing:Science Press,1978:88
[2] 程虎印,颜永刚,刘亮亮,等.陕产重楼属南重楼组药用植物类群及资源调查[J].中国中医药信息杂志,2018,25(3):1 CHENG HY,YAN YG,LIU LL,et al.An investigation on the new distribution records of Sect.Euthya medicinal plants in Paris L.from Shaanxi Province[J].Chin J Inform TCM,2018,25(3):1
[3] 蒋露,康利平,刘大会,等.历代本草重楼基原考[J].中国中药杂志,2017,42(18):3469 JIANG L,KANG LP,LIU DH,et al.Herbal textual research on origins of Chonglou[J].China J Chin Mater Med,2017,42(18):3469
[4] 王跃虎,牛红梅,张兆云,等.重楼属植物的药用价值及其化学物质基础[J].中国中药杂志,2015,40(5):833 WANG YH,NIU HM,ZHANG ZY,et al.Medicinal values and their chemical bases of Paris[J].China J Chin Mater Med,2015,40(5):833
[5] 杨德全,杨勤,周浓.多基源重楼的质量等同性研究[J].中国实验方剂学杂志,2014,20(3):91 YANG DQ,YANG Q,ZHOU N.Preliminary Study on Quality Equivalence of Rhizoma Paridis from Various Species[J].Chin J Pharmacol,2014,20(3):91
[6] 杨远贵,张霁,张金渝,等.重楼属植物化学成分及药理活性研究进展[J].中草药,2016,47(18):3301 YANG YG,ZHANG J,ZHANG JY,et al.Research progress in chemical constituents in plants of Paris L.and their pharmacological effects[J].Chin Tradit Herb Drugs,2016,47(18):3301
[7] 刘湘丹,王朝辉,徐玉琴,等.中药材重楼研究进展[J].中医药导报,2015,20(15):90 LIU XD,WANG CH,XU YQ,et al.Research progress on Chonglou(Paridis Rhizoma)[J].Guid J Tradit Chin Med Pharm,2015,20(15):90
[8] 过立农,刘杰,朱玲,等.基于DNA条形码技术的重楼栽培品基原鉴定[J].药物分析杂志,2018,38(5):857 GUO LN,LIU J,ZHU L,et al.Original identification of Paridis Rhizoma based on DNA barcoding technology[J].Chin J Pharm Anal,2018,38(5):857
[9] 王娟,尹博睿,何燕.重楼属植物的本草学和民族植物学研究[J].云南中医中药杂志,2017,38(05):80 WANG J,YIN BR,HE Y.Study on herbology and ethnobotany of Paris L.[J].Yunnan Tradit Chin Med Mag,2017,38(5):80
[10] 张亚茹,彭献娜,王彩虹,等.重楼活性化学成分与药理作用研究进展[J].亚太传统医药,2015,11(2):39 ZHANG YR,PENG XN,WANG CH,et al.Research progress on active chemical constituents and pharmacological effects of Chonglou(Paridis Rhizoma)[J].Asia-Pasific Tradit Med,2015,11(2):39
[11] MAN SL,CHAI HY,CUI JX,et al.Antitumor and anti-metastatic mechanisms of Rhizoma Paridis saponins in Lewis mice.[J].Envir Toxicol,2018,33(2):149
[12] 赵飞亚,陶爱恩,夏从龙.基于国内专利结合资源、应用与开发现状的重楼发展策略探讨[J].中国中药杂志,2018,43(2):404 ZHAO FY,TAO AN,XIA CL.Development strategy of Paris based on combination of domestic patent and current resource application and development[J].China J Chin Mater Med,2018,43(2):404
[13] 中华人民共和国药典2015年版.一部[S].2015:260 ChP 2015.Vol Ⅰ[S].2015:260
[14] 程虎印,刘亮亮,程江雪,等.华阴市产重楼属药用植物生态特点及资源状况调查[J].中国现代应用药学,2017,34(5):674 CHENG HY,LIU LL,CHENG JX,et al.Investigation of physiological characteristics and resources status of Paris L.in Huayin City[J].Chin J Mod Appl Pharm,2017,34(5):674
[15] 杨光义,胡培,叶方,等.重楼资源分布与可持续利用研究进展[J].中国药师,2016,19(1):159 YANG GY,HU P,YE F,et al.Research progress in resources distribution and sustainable utilization of Rhizoma Paridis[J].China Pharm,2016,19(1):159
[16] 成莉,甄艳,陈敏,等.扩大重楼药用资源研究进展[J].中国中药杂志,2015,40(16):3121 CHENG L,ZHEN Y,CHEN M,et al.Research progress on enlargement of medicinal resources of Paridis Rhizome[J].Chin J Chin Mater Med,2015,40(16):3121
[17] 程虎印,程江雪,王艳,等.陕产宽叶重楼的生药学研究[J].中国现代中药,2019,21(02):188 CHENG HY,CHENG JX,WANG Y,et al.Pharmacognostical studies of Paris polyphylla var.latifolia from Shaanxi Province[J].Mod Chin Med,2019,21(2):188
[18] PETRINI O.Fungal endophytes of tree leaves[M]/Andrews J H,Hirana SS.Microbal ecology of leaves.New York:Springer-Verlag,1991:179
[19] HACQUARD S,GARRIDO-OTER R,GONZAIEZ A,et al.Microbiota and host nutrition across plant and animal kingdoms[J].Cell Host Microb.2015;17(5):603
[20] 李纲,张一帆,陈奔,等.平台化高通量pH梯度阳离子色谱法在单克隆抗体电荷异质性分析中的应用研究[J].药物分析杂志,2018,38(2):293 LI G,ZHANG YF,CHEN B,et al.The application of a high-throughput pH gradient cation-exchange chromatography method for charge variants separation of multiple monoclonal antibodies[J].Chin J Pharm Anal,,2018,38(2):293
[21] KHAN AL,HANMAYUN M,KIM YH,et al.Ameliorative symbiosis of endophyte(Penicillium funiculosum LHL06)under salt stress elevated plant growth of Glycine max L.[J].Plant Physiol Biochem,2011,49(8):852
[22] KHAN AL,HANMAYUN M,Kim YH,et al.Gibberellins producing endophytic Aspegillus fumigates sp.LH02 influenced endogenous phytohormonal levels is oflavonoids production and plant growth in salinity stress[J].Procss Biochem,2011,46(2):440
[23] 李俊峰,刘文洪,张贝贝,等.铁皮石斛内生菌的分离及代谢产物活性的初步研究[J].中华中医药杂志,2016,31(3):970 LI JF,LIU WH,ZHANG BB,et al.Preliminary study on separation of endophytes from dendrobium officinale and activity of metabolites[J].China J Tradit Chin Med Pharm,2016,31(3):970
[24] HUANG WJ,LONG CL,LAM E.Roles of plant associated microbiota in traditional herbal medicine[J].Trends Plant Sci,2018,23(7):559
[25] 赵志勇,高文远,黄贤校,等.长药隔重楼化学成分研究[J].中草药,2011,42(10):1917 ZHAO ZY,GAO WY,HUANG XX,et al.Chemical constituents in Paris polyphylla var.pseudothibetica[J].Chin Tradit Herb Drugs,2011,42(10):1917
[26] 刘显波,张浩,雍正平,等.长药隔重楼中甾体皂苷成分的分离与结构鉴定[J].华西药学杂志,2010,25(05):508 LIU XB,ZHANG H,YONG ZP,et al.Isolation and identification of steroidal saponins of Paris polyphylla Smith var.pseudothibetica[J].West China Pharm J,2010,25(5):508
[27] SCHLOSS PD,GEVERS D,WESTCOTT SL.Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies[J].PLoS ONE,2011,6(12):e27310
[28] K0LJALG U,NILSSON RH,ABARENKOV K,et al.Towards a unified paradigm for sequence-based identification of fungi[J].Molecul Ecol,2013,22(21):5271
[29] CHEN H,PAUL CB.Venn Diagram:a package for the generation of highly-customizable Venn and Euler diagrams in R.[J].BMC Bioinf,2011;12(1):35
[30] 汤涤洛,涂修亮,付聪,等.基于高通量测序的苎麻根际土壤真菌群落结构[J].西南农业学报,2018,31(10):2160 TANG DL,TU XL,FU C,et al.Illumina miseq sequencing-based fungal community of Rhizosphere soils along root of Ramie[J].Southwest China J Agr Sci,2018,31(10):2160
[31] ZHOU LG,CAO XD,YANG CZ,et al.Endophytic fungi of Paris Polyphylla var.yunnanensis and steroid analysis in the fungi[J].Nat Product Res Develop,2004,16(3):198
[32] GUO SX.Endophytic Mycology of Medicinal Plants[M].ISBN:9787030476852.2017
[33] EDWARDS J,JOHNSON C,SANTOS-MENLLIN C,et al.Structure variation and assembly of the root-associated microbiomes of rice[J].Proc Natl Acad Sci,2015,112(8):911

欢迎阅读《药物分析杂志》!您是该文第 535位读者!

药物分析杂志 © 2009
地址:北京天坛西里2号 邮政编码:100050; 电子邮件:ywfx@nicpbp.org.cn